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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015939290.1_cds_XP_016483946.1_75011
CDS Infomation

[gene=LOC107804549] [db_xref=GeneID:107804549] [protein=UPF0183 protein At3g51130-like isoform X1] [protein_id=XP_016483946.1] [location=complement(join(40578..40625,40767..40871,41179..41255,41349..41448,41525..41638,41752..41799,42298..42360,43288..43454,43559..43619,43721..43826,43944..44011,46651..46725,47354..47436,47636..47729))] [gbkey=CDS]
Sequence

ATGCAGAGGCCGAGACGCCGCTGCGAAGGCACAGCCATGGGCGCTATCGTTCTCGATCTC
CGCCCTGGTGCTGGCATCGGTCCTTTTACTCTCGGAATGCCTATTTGCGAAGCTTTTGCA
CAGATAGAGCAGCAGCCTAACATTTACGATGTTGTCCATGTGAAGTATTATGATGAGGAG
CCCTTAAAACTTGACATTGTCATTAGCTTCCCAGATCATGGATTTCATCTGCGGTTTGAT
CCTTGGTCGCAGAGGCTGCGCCTTGTTGAAATTTTTGATGTAAAACGGCTCCAGATGCGC
TATGCAACCTCTGTAATAGGTGGGCCGTCCACTTTAGCCACTTTTGTAGCAGTCTATACT
CTTTTTGGGCCAACCTATCCAGGAACATATGACAAGGATCGAGGAGTTTACACTCTATTT
TATCCAGGATTGTCGTTTGCTTTTCCAATTCCCTCCCAGTATACAGACTGTTGTCGTGAT
GGAGAAGCGGAACTACCTCTGGAGTTTCCAGATGGCACGACTCCTGTTACTTGCCGTGTA
TCAATATATGATAGTTCTACTGGCAGTAAAGTTGGCGTTGGATCTATGATGGACAAGGCC
TGTACTCCTCCACTTCCTGCTGGCAGCCTCTACATGGAAGAAGTGCATGTAAAGCTGGGG
GAAGAATTATGGTTTAGCATTGGTGGCCAACACATCCCCTTTGGTGCATCACCACAGGAT
GTTTGGACCGAATTAGGTCGACCATGCGGAATCCATCAGAAACAGGTCGATCAAATGGTG
ATTCATTCTGCTTCAGATCCCAGACCGAGGACCACCCTTTGTGGTGATTACTTCTACAAC
TACTTTACTCGTGGCATAGATATACTATTTGATGGGCAGACACATAAGATCAAGAAGTTT
GTCTTGCACACCAACTATCCTGGGCATGCCGATTTCAATTCATATATGAAGTGCAATTTT
GTTATCCACTGTTCTGATTTTGTTGGGTCATATAATCAGGATGTAAACTCCTCTAAAGGC
ACTATAACAGCCAGCTCAAAGTGGGAACAAGTTAAGGAGATACTAGGGGATTGTGGTCGA
GCTGCTATCCAAACGCAAGGCTCTACAAGCAATCCATTTGGATCTACCTTTGTATATGGC
TACCAAAATCTTGCCTTTGAGGTGATGAAGAATGGTTACATTGCGACTGTAACTCTCTTC
CAGTCTTAA

Peptide Sequence

PEP ID

XP_016483946.1
PEP Infomation

PREDICTED: UPF0183 protein At3g51130-like isoform X1 [Nicotiana tabacum]
Sequence

MQRPRRRCEGTAMGAIVLDLRPGAGIGPFTLGMPICEAFAQIEQQPNIYDVVHVKYYDEE
PLKLDIVISFPDHGFHLRFDPWSQRLRLVEIFDVKRLQMRYATSVIGGPSTLATFVAVYT
LFGPTYPGTYDKDRGVYTLFYPGLSFAFPIPSQYTDCCRDGEAELPLEFPDGTTPVTCRV
SIYDSSTGSKVGVGSMMDKACTPPLPAGSLYMEEVHVKLGEELWFSIGGQHIPFGASPQD
VWTELGRPCGIHQKQVDQMVIHSASDPRPRTTLCGDYFYNYFTRGIDILFDGQTHKIKKF
VLHTNYPGHADFNSYMKCNFVIHCSDFVGSYNQDVNSSKGTITASSKWEQVKEILGDCGR
AAIQTQGSTSNPFGSTFVYGYQNLAFEVMKNGYIATVTLFQS

Transcript Sequence

Gene sequence data has not been registered.